Miyakogusa Predicted Gene

Lj1g3v1931430.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XPR0_PRUPE 426 67.4 71.3 (tr|M5XPR0) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008047mg PE=4 SV=1
TAIR_pep AT3G24350.1 320 55.3 63.2 | Symbols: SYP32, ATSYP32 | syntaxin of plants 32 | chr3:8837733-8839402 FORWARD LENGTH=347
Medicago Medtr3g108160.1 382 63.7 67.9 | syntaxin of plants protein | HC | chr3:49983199-49979202 | 20130731
Soybean Glyma06g07770.1 412 68.6 70.8  
LJGI gnl|LJGI|TC59354 1051 97.1 97.1 similar to UniRef100_A7PEU9 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1931430.2 length: 344 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 1.7e-16 258-316
HMMSmart SM00397 Helical 2e-15 247-314
ProfileScan PS50192 T_SNARE 17.281 252-314
IPR006011 Syntaxin, N-terminal
Cellular Component GO:0016020 membrane    
HMMPfam PF00804 Syntaxin 4e-14 54-159
IPR006012 Syntaxin/epimorphin, conserved site
Molecular Function GO:0005484 SNAP receptor activity    
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00914 SYNTAXIN NA 258-297
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 5.6e-43 51-307
no_ID  
Gene3D G3DSA:1.20.58.70 no description 6.2e-46 221-308
HMMPanther PTHR19957 SYNTAXIN 2.6e-131 11-343
HMMPanther PTHR19957:SF3 SYNTAXIN 2.6e-131 11-343
Seg seg seg NA 27-50
74-83
129-143
195-214
235-246
326-343
Putative transmembrane regions
  From To
TM segments
SOSUI		 318 340
Wolf-PSORT
Lj1g3v1931430.2	golg 4, nucl_plas 2.5, chlo 2, plas 2, vacu 2, mito 1, E.R. 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1931430.2