Miyakogusa Predicted Gene

Lj1g3v1931430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SC69_LOTJA 512 79.1 79.8 (tr|I3SC69) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G24350.1 324 56.1 64.8 | Symbols: SYP32, ATSYP32 | syntaxin of plants 32 | chr3:8837733-8839402 FORWARD LENGTH=347
Medicago Medtr3g108160.1 405 70.4 74.3 | syntaxin of plants protein | HC | chr3:49983199-49979202 | 20130731
Soybean Glyma06g07770.1 457 72.9 75.4  
LJGI gnl|LJGI|TC60716 1927 99.7 99.7 similar to UniRef100_A7P5H6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1931430.1 length: 345 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 1.7e-16 259-317
HMMSmart SM00397 Helical 1.9e-15 248-315
ProfileScan PS50192 T_SNARE 17.281 253-315
IPR006011 Syntaxin, N-terminal
Cellular Component GO:0016020 membrane    
HMMPfam PF00804 Syntaxin 1.2e-13 55-160
IPR006012 Syntaxin/epimorphin, conserved site
Molecular Function GO:0005484 SNAP receptor activity    
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00914 SYNTAXIN NA 259-298
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 1.6e-42 52-308
no_ID  
Gene3D G3DSA:1.20.58.70 no description 7.1e-45 224-309
HMMPanther PTHR19957 SYNTAXIN 8.3e-131 9-344
HMMPanther PTHR19957:SF3 SYNTAXIN 8.3e-131 9-344
Seg seg seg NA 33-53
71-87
213-221
234-252
327-344
Putative transmembrane regions
  From To
TM segments
SOSUI		 319 341
Wolf-PSORT
Lj1g3v1931430.1	golg 4, nucl_plas 3.5, chlo 3, nucl 3, plas 2, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1931430.1