Miyakogusa Predicted Gene

Lj1g3v1931420.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JUJ5_SOYBN 178 39.2 41.3 (tr|I1JUJ5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G25670.2 89.0 33.5 39.4 | Symbols: | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). | chr2:10929062-10930619 REVERSE LENGTH=318

Medicago Medtr3g108100.1 125 33.6 36.7 | copper ion-binding protein, putative | HC | chr3:49958927-49955472 | 20130731

Soybean Glyma04g07650.1 178 39.2 41.3

LJGI gnl|LJGI|TC73806 1253 100.0 100.0 similar to UniRef100_A7P5H5 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1931420.1 length: 323 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 157-178
224-245

HMMPanther PTHR31365 FAMILY 3.8e-73 1-323

Seg seg seg NA 24-54
72-78
100-132
158-179
201-215
218-236
270-314

Wolf-PSORT

Lj1g3v1931420.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1931420.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JUJ5_SOYBN	178	39.2	41.3	(tr\|I1JUJ5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G25670.2	89.0	33.5	39.4	\| Symbols: \| BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). \| chr2:10929062-10930619 REVERSE LENGTH=318
Medicago	Medtr3g108100.1	125	33.6	36.7	\| copper ion-binding protein, putative \| HC \| chr3:49958927-49955472 \| 20130731
Soybean	Glyma04g07650.1	178	39.2	41.3
LJGI	gnl\|LJGI\|TC73806	1253	100.0	100.0	similar to UniRef100_A7P5H5 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)

no_ID
Lj1g3v1931420.1				length: 323 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	157-178 224-245
HMMPanther	PTHR31365	FAMILY	3.8e-73	1-323
Seg	seg	seg	NA	24-54 72-78 100-132 158-179 201-215 218-236 270-314