Miyakogusa Predicted Gene
- Lj1g3v1931400.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MMW1_SOYBN |
1273 |
75.5 |
83.9 |
(tr|K7MMW1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G25660.1 |
1102 |
65.4 |
79.4 |
| Symbols: emb2410 | embryo defective 2410 | chr2:10916456-10927390 REVERSE LENGTH=2166 |
| Medicago |
Medtr1g010300.1 |
1274 |
75.6 |
84.1 |
| embryo defective 2410 protein | HC | chr1:1902541-1916763 | 20130731 |
| Soybean |
Glyma17g30240.1 |
1272 |
75.5 |
83.9 |
|
| LJGI |
gnl|LJGI|BP074982 |
63.9 |
89.3 |
89.3 |
similar to UniRef100_Q0JQ65 Cluster: Os01g0179400 protein; n=2; Oryza sativa Japonica Group|Rep: Os01g0179400 protein - Oryza sativa subsp. japonica (Rice), partial (3%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1931400.2 |
length: 831 aa. |
| IPR007452 |
Protein of unknown function DUF490 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04357 |
DUF490 |
1.5e-26 |
427-817 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
91-105 |
- Wolf-PSORT
Lj1g3v1931400.2 cyto 5, nucl 3, plas 2, E.R. 2, cysk_nucl 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1931400.2 |
|