Miyakogusa Predicted Gene

Lj1g3v1930230.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JMK2_SOYBN 390 87.2 91.6 (tr|I1JMK2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G02180.1 245 67.1 81.8 | Symbols: | ferredoxin-related | chr1:413619-414505 REVERSE LENGTH=226

Medicago Medtr8g009260.1 361 84.0 90.2 | ferredoxin-like protein | HC | chr8:2093925-2090866 | 20130731

Soybean Glyma03g24950.1 390 87.2 91.6

LJGI gnl|LJGI|TC79509 1332 100.0 100.0 similar to UniRef100_A7PK44 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%)

Putative transmembrane regions

From To

TM segments
SOSUI 5 26

204 224

Wolf-PSORT

Lj1g3v1930230.1 plas 5, vacu 4, chlo 2, golg 2, E.R._vacu 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1930230.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JMK2_SOYBN	390	87.2	91.6	(tr\|I1JMK2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G02180.1	245	67.1	81.8	\| Symbols: \| ferredoxin-related \| chr1:413619-414505 REVERSE LENGTH=226
Medicago	Medtr8g009260.1	361	84.0	90.2	\| ferredoxin-like protein \| HC \| chr8:2093925-2090866 \| 20130731
Soybean	Glyma03g24950.1	390	87.2	91.6
LJGI	gnl\|LJGI\|TC79509	1332	100.0	100.0	similar to UniRef100_A7PK44 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%)