Miyakogusa Predicted Gene
- Lj1g3v1911640.5
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TNH5_SOYBN |
214 |
64.5 |
73.4 |
(tr|C6TNH5) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G25360.2 |
155 |
51.2 |
66.9 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). | chr5:8799934-8802333 REVERSE LENGTH=169 |
| Medicago |
Medtr3g107310.1 |
209 |
67.4 |
77.1 |
| DUF4050 family protein | HC | chr3:49505990-49502026 | 20130731 |
| Soybean |
Glyma04g07120.2 |
214 |
64.5 |
73.4 |
|
| LJGI |
gnl|LJGI|BP053975 |
101 |
100.0 |
100.0 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1911640.5 |
length: 170 aa. |
| IPR025124 |
Domain of unknown function DUF4050 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF13259 |
DUF4050 |
1.6e-22 |
70-169 |
- Wolf-PSORT
Lj1g3v1911640.5 extr 6, chlo 3, nucl 3, cyto 1, E.R. 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1911640.5 |
|