Miyakogusa Predicted Gene

Lj1g3v1900590.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1K8U4_SOYBN 645 57.5 68.9 (tr|I1K8U4) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT3G11760.1 301 52.6 67.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:3718529-3721123 FORWARD LENGTH=702

Medicago Medtr3g107090.1 588 55.8 66.8 | hypothetical protein | HC | chr3:49452455-49448631 | 20130731

Soybean Glyma06g07160.1 617 56.3 66.4

LJGI gnl|LJGI|TC59966 73.8 87.0 87.0 similar to UniRef100_A7Q079 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1900590.1 length: 618 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31182 FAMILY 8.8e-114 318-599

Seg seg seg NA 223-236
240-257
600-615

Wolf-PSORT

Lj1g3v1900590.1 nucl 5, mito 4, chlo 3, cyto_nucl 3, cysk_nucl 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1900590.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1K8U4_SOYBN	645	57.5	68.9	(tr\|I1K8U4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT3G11760.1	301	52.6	67.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr3:3718529-3721123 FORWARD LENGTH=702
Medicago	Medtr3g107090.1	588	55.8	66.8	\| hypothetical protein \| HC \| chr3:49452455-49448631 \| 20130731
Soybean	Glyma06g07160.1	617	56.3	66.4
LJGI	gnl\|LJGI\|TC59966	73.8	87.0	87.0	similar to UniRef100_A7Q079 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=2; Vitis vinifera\|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)

no_ID
Lj1g3v1900590.1				length: 618 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31182	FAMILY	8.8e-114	318-599
Seg	seg	seg	NA	223-236 240-257 600-615