Miyakogusa Predicted Gene

Lj1g3v1878490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K8T2_SOYBN 2776 86.6 90.4 (tr|I1K8T2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25320.1 2227 69.9 80.0 | Symbols: | TRAF-like family protein | chr2:10781951-10788065 REVERSE LENGTH=1673
Medicago Medtr3g106700.1 2780 86.2 90.1 | CGS1 mRNA stability protein | HC | chr3:49315548-49304426 | 20130731
Soybean Glyma06g07050.1 2776 86.6 90.4  
LJGI gnl|LJGI|TC80937 728 100.0 100.0 similar to UniRef100_A7P5V8 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1878490.1 length: 1565 aa.
IPR002083 MATH
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00917 MATH 0.00034 8-78
293-423
466-578
HMMSmart SM00061 meprin 0.2 123-236
291-403
456-559
ProfileScan PS50144 MATH 13.794 1-77
118-255
286-422
454-578
IPR008974 TRAF-like
Molecular Function GO:0005515 protein binding    
superfamily SSF49599 TRAF 2.2e-13 283-428
115-267
451-578
8-89
no_ID  
BlastProDom PD936484 Q806D4_9VIRU_Q806D4; 3e-07 1265-1487
Coil coil coiled-coil NA 1292-1398
1405-1447
Gene3D G3DSA:2.60.210.10 no description 1.8e-17 117-259
273-425
448-582
HMMPanther PTHR24007 FAMILY 1e-268 1-509
HMMPanther PTHR24007:SF2 SUBFAMILY 1e-268 1-509
Seg seg seg NA 95-119
439-456
607-625
783-797
1251-1263
Wolf-PSORT
Lj1g3v1878490.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1878490.1