Miyakogusa Predicted Gene

Lj1g3v1853300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JU99_SOYBN 551 69.5 74.7 (tr|I1JU99) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G25220.2 498 62.8 68.9 | Symbols: KNAT3 | KNOTTED1-like homeobox gene 3 | chr5:8736208-8738087 FORWARD LENGTH=419
Medicago Medtr1g012960.1 534 65.8 70.5 | class II knotted-like homeobox protein | HC | chr1:2747519-2743275 | 20130731
Soybean Glyma17g32980.1 535 68.5 73.3  
LJGI gnl|LJGI|TC59795 726 99.7 99.7 similar to UniRef100_A5Y4G8 Cluster: Class II KNOX homeobox transcription factor; n=1; Medicago truncatula|Rep: Class II KNOX homeobox transcription factor - Medicago truncatula (Barrel medic), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1853300.1 length: 406 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 5.7e-11 330-395
ProfileScan PS50071 HOMEOBOX_2 11.888 328-391
IPR005539 ELK
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03789 ELK 2.4e-07 308-329
ProfileScan PS51213 ELK 9.673 308-328
IPR005540 KNOX1
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03790 KNOX1 1.5e-18 141-184
IPR005541 KNOX2
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03791 KNOX2 5.3e-22 197-251
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 2.7e-16 348-387
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.5e-24 335-393
superfamily SSF46689 Homeodomain-like 3.2e-15 314-390
no_ID  
HMMPanther PTHR11850 HOMEOBOX 9.2e-81 143-389
Seg seg seg NA 20-36
63-94
264-273
Wolf-PSORT
Lj1g3v1853300.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1853300.1