| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I3TAT1_LOTJA | 392 | 100.0 | 100.0 | (tr|I3TAT1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep | AT2G25110.1 | 329 | 82.3 | 90.9 | | Symbols: SDF2, ATSDL, AtSDF2 | stromal cell-derived factor 2-like protein precursor | chr2:10684428-10685838 FORWARD LENGTH=218 |
| Medicago | Medtr3g106130.1 | 370 | 93.0 | 96.3 | | stromal cell-derived factor-like protein | HC | chr3:48990843-48994869 | 20130731 |
| Soybean | Glyma04g06580.1 | 377 | 95.2 | 97.9 | |
| LJGI | gnl|LJGI|TC73948 | 1122 | 100.0 | 100.0 | similar to UniRef100_Q93ZE8 Cluster: Stromal cell-derived factor 2-like protein precursor; n=2; Arabidopsis thaliana|Rep: Stromal cell-derived factor 2-like protein precursor - Arabidopsis thaliana (Mouse-ear cress), partial (96%) |
| Lj1g3v1819850.3 | length: 226 aa. | |||
| IPR016093 | MIR motif | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Cellular Component | GO:0016020 | membrane | ||
| HMMPfam | PF02815 | MIR | 1.4e-16 | 63-205 |
| HMMSmart | SM00472 | Domain | 3.3e-14 | 43-97 105-160 163-217 |
| ProfileScan | PS50919 | MIR | 12.420 | 43-97 105-160 163-217 |
| superfamily | SSF82109 | MIR | 2.2e-56 | 40-218 |
| IPR027005 | Glycosyltransferase 39 like | |||
| HMMPanther | PTHR10050 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN | 8.7e-121 | 1-226 |
| no_ID | ||||
| Gene3D | G3DSA:2.80.10.50 | no description | 1.1e-60 | 45-221 |
| HMMPanther | PTHR10050:SF6 | STROMAL | 8.7e-121 | 1-226 |
| Seg | seg | seg | NA | 2-39 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
1 | 17 |
Lj1g3v1819850.3 extr 6, vacu 3, nucl 2, E.R. 1.5, cyto_nucl 1.5, E.R._plas 1.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v1819850.3 | Not targeted | -38.726 | -3.212 | -1.376 | 50.39% | -34.137 |