Miyakogusa Predicted Gene

Lj1g3v1818790.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JU82_SOYBN 1763 89.1 92.4 (tr|I1JU82) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G25140.1 1489 78.4 87.4 | Symbols: HSP98.7, CLPB-M, CLPB4 | casein lytic proteinase B4 | chr2:10697877-10701998 REVERSE LENGTH=964
Medicago Medtr3g106160.1 1753 87.9 91.6 | chaperone ClpB, putative | HC | chr3:49015432-49006958 | 20130731
Soybean Glyma04g06610.1 1763 89.1 92.4  
LJGI gnl|LJGI|TC69453 952 100.0 100.0 similar to UniRef100_Q9LLI0 Cluster: ClpB; n=1; Phaseolus lunatus|Rep: ClpB - Phaseolus lunatus (Lima bean) (Phaseolus limensis), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1818790.2 length: 976 aa.
IPR001270 Chaperonin ClpA/B
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
FPrintScan PR00300 CLPPROTEASEA 1.3e-39 691-709
736-754
765-783
798-812
PatternScan PS00871 CLPAB_2 NA 721-739
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.3e-11 284-429
687-828
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 7.5e-14 290-423
IPR004176 Clp, N-terminal
Biological Process GO:0019538 protein metabolic process    
HMMPfam PF02861 Clp_N 9.1e-12 103-154
182-231
IPR013093 ATPase, AAA-2
Molecular Function GO:0005524 ATP binding    
HMMPfam PF07724 AAA_2 1.7e-54 686-855
IPR017730 Chaperonin ClpB
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0009408 response to heat    
Biological Process GO:0016485 protein processing    
HMMTigr TIGR03346 chaperone_ClpB: 0 92-945
IPR018368 Chaperonin ClpA/B, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00870 CLPAB_1 NA 380-392
IPR019489 Clp ATPase, C-terminal
HMMPfam PF10431 ClpB_D2-small 1.1e-22 862-941
HMMSmart SM01086 C-terminal, 2.8e-28 862-956
IPR023150 Double Clp-N motif
Gene3D G3DSA:1.10.1780.10 no description 4.1e-41 89-234
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.6e-85 244-635
636-945
no_ID  
Coil coil coiled-coil NA 498-519
520-548
558-579
585-620
Gene3D G3DSA:1.10.8.60 no description 1.1e-25 429-512
874-947
Gene3D G3DSA:3.40.50.300 no description 1.4e-55 245-424
842-873
HMMPanther PTHR11638 ATP-DEPENDENT 0 77-945
HMMPanther PTHR11638:SF18 CHAPERONE 0 77-945
Seg seg seg NA 24-41
452-464
superfamily SSF81923 Double 5.8e-41 90-242
Wolf-PSORT
Lj1g3v1818790.2	chlo 11.5, chlo_mito 7, mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1818790.2