Miyakogusa Predicted Gene

Lj1g3v1812230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KTD3_SOYBN 1784 79.7 86.7 (tr|K7KTD3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G31850.1 1334 61.0 75.8 | Symbols: PGR3 | proton gradient regulation 3 | chr4:15403020-15406358 FORWARD LENGTH=1112
Medicago Medtr3g105900.1 1734 76.5 85.9 | proton gradient regulation protein | HC | chr3:48847086-48840643 | 20130731
Soybean Glyma06g06430.1 1575 83.5 90.1  
LJGI gnl|LJGI|AV421386 561 98.7 98.7 weakly similar to UniRef100_A7P654 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1812230.1 length: 1118 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 6.4e-05 198-227
444-473
795-824
900-927
HMMPfam PF12854 PPR_1 7.5e-10 262-293
647-679
HMMPfam PF13041 PPR_2 1.9e-09 300-348
370-418
510-559
580-629
826-875
931-979
1001-1045
1071-1111
HMMTigr TIGR00756 PPR: 3.2e-07 234-267
268-302
303-336
338-372
373-406
408-441
443-476
479-512
513-547
550-581
583-617
618-652
654-680
795-828
829-863
864-897
899-932
935-967
970-1003
1004-1037
1039-1073
1074-1108
ProfileScan PS51375 PPR 11.948 126-156
196-230
161-195
231-265
266-300
301-335
336-370
371-405
406-440
441-475
511-545
476-510
546-580
581-615
616-650
651-681
685-720
792-826
756-791
827-861
862-896
897-931
932-966
967-1001
1002-1036
1037-1071
1072-1106
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.4e-08 507-642
908-1097
no_ID  
HMMPanther PTHR24015 FAMILY 0 95-1101
HMMPanther PTHR24015:SF98 SUBFAMILY 0 95-1101
Seg seg seg NA 7-23
101-116
735-746
superfamily SSF48452 TPR-like 0.00071 333-433
superfamily SSF81901 HCP-like 1.8e-08 862-1097
409-656
Wolf-PSORT
Lj1g3v1812230.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1812230.1