Miyakogusa Predicted Gene

Lj1g3v1810100.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC82639 178 96.2 96.2 homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)

Putative transmembrane regions

From To

TM segments
SOSUI 13 35

Wolf-PSORT

Lj1g3v1810100.1 chlo 4, extr 4, cyto 3, vacu 1.5, cyto_nucl 1.5, E.R._vacu 1.5, cyto_pero 1.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1810100.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC82639	178	96.2	96.2	homologue to UniRef100_A7PMS9 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)