Miyakogusa Predicted Gene
- Lj1g3v1810070.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JU46_SOYBN |
1195 |
84.6 |
89.9 |
(tr|I1JU46) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G24970.2 |
978 |
71.0 |
81.7 |
| Symbols: | Protein kinase superfamily protein | chr5:8604358-8608656 REVERSE LENGTH=761 |
| Medicago |
Medtr3g105760.1 |
1117 |
79.1 |
86.7 |
| AarF domain kinase | HC | chr3:48788653-48779840 | 20130731 |
| Soybean |
Glyma04g06260.1 |
1183 |
84.3 |
89.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1810070.1 |
length: 719 aa. |
| IPR004147 |
UbiB domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03109 |
ABC1 |
5.5e-28 |
197-300 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
9.9e-17 |
207-436 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.1200.10 |
no description |
0.00058 |
353-410 |
| HMMPanther |
PTHR10566 |
CHAPERONE-ACTIVITY |
1.3e-137 |
136-560 |
| HMMPanther |
PTHR10566:SF10 |
ABC1 |
1.3e-137 |
136-560 |
| Seg |
seg |
seg |
NA |
2-17 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
107 |
129 |
- Wolf-PSORT
Lj1g3v1810070.1 chlo 5, cyto 5, mito 2.5, cyto_pero 2.5, cyto_E.R. 2.5, cyto_plas 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1810070.1 |
|