Miyakogusa Predicted Gene

Lj1g3v1788380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S402_LOTJA 227 81.1 81.1 (tr|I3S402) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G20650.1 142 50.7 60.0 | Symbols: COPT5 | copper transporter 5 | chr5:6985481-6985921 REVERSE LENGTH=146
Medicago Medtr3g105330.1 187 62.9 71.3 | Ctr family copper transporter | HC | chr3:48558375-48557635 | 20130731
Soybean Glyma06g06000.1 183 60.8 69.9  
LJGI gnl|LJGI|TC65095 858 100.0 100.0 similar to UniRef100_A7P4V3 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1788380.1 length: 143 aa.
IPR007274 Ctr copper transporter
method AccNumber shortName E-value location
Molecular Function GO:0005375 copper ion transmembrane transporter activity    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0035434 copper ion transmembrane transport    
HMMPanther PTHR12483 SOLUTE 7.7e-46 1-129
HMMPfam PF04145 Ctr 1.5e-28 2-126
no_ID  
HMMPanther PTHR12483:SF1 COPPER 7.7e-46 1-129
Seg seg seg NA 72-86
128-139
Putative transmembrane regions
  From To
TM segments
SOSUI		 26 46
100 122
Wolf-PSORT
Lj1g3v1788380.1	plas 4, cyto 3.5, chlo 3, cyto_nucl 3, E.R._plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1788380.1