Miyakogusa Predicted Gene
- Lj1g3v1788310.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K8H4_SOYBN |
412 |
83.1 |
90.0 |
(tr|I1K8H4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G43860.1 |
333 |
65.1 |
78.0 |
| Symbols: AtGH9A4, GH9A4 | glycosyl hydrolase 9A4 | chr3:15707183-15709438 FORWARD LENGTH=486 |
| Medicago |
Medtr3g023740.1 |
405 |
81.0 |
88.4 |
| glycosyl hydrolase family 9 protein | HC | chr3:7222967-7220730 | 20130731 |
| Soybean |
Glyma06g05950.1 |
412 |
83.1 |
90.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1788310.1 |
length: 245 aa. |
| IPR001701 |
Glycoside hydrolase, family 9 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00759 |
Glyco_hydro_9 |
9e-55 |
1-239 |
| IPR008928 |
Six-hairpin glycosidase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF48208 |
Six-hairpin |
4.9e-55 |
1-245 |
| IPR012341 |
Six-hairpin glycosidase |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:1.50.10.10 |
no description |
6.2e-60 |
1-242 |
| no_ID |
|
| HMMPanther |
PTHR22298 |
ENDO-1,4-BETA-GLUCANASE |
9.8e-97 |
1-245 |
| HMMPanther |
PTHR22298:SF3 |
ENDO-1,4-BETA-GLUCANASE |
9.8e-97 |
1-245 |
| Seg |
seg |
seg |
NA |
233-243 |
- Wolf-PSORT
Lj1g3v1788310.1 nucl 8, chlo 2, mito 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1788310.1 |
Not targeted |
-46.787 |
-12.743 |
-11.523 |
68.27% |
-22.521
|