Miyakogusa Predicted Gene

Lj1g3v1788240.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A7ISW5_SOYBN 1423 81.2 85.8 (tr|A7ISW5) Copper P1B-ATPase OS=Glycine max GN=HMA8 PE=2 SV=1
TAIR_pep AT5G21930.2 1131 67.6 79.9 | Symbols: PAA2, HMA8 | P-type ATPase of Arabidopsis 2 | chr5:7243129-7248721 FORWARD LENGTH=883
Medicago Medtr3g105190.1 1354 78.8 84.5 | copper-transporting ATPase PAA1, putative | HC | chr3:48478621-48488601 | 20130731
Soybean Glyma06g05890.1 1390 79.7 84.9  
LJGI gnl|LJGI|FS344188 1126 98.8 98.8 similar to UniRef100_A7ISW5 Cluster: Copper P1B-ATPase; n=1; Glycine max|Rep: Copper P1B-ATPase - Glycine max (Soybean), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1788240.2 length: 885 aa.
IPR001757 Cation-transporting P-type ATPase
method AccNumber shortName E-value location
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0019829 cation-transporting ATPase activity    
FPrintScan PR00119 CATATPASE 9.7e-23 385-399
552-566
688-699
710-720
765-784
HMMPanther PTHR24093 FAMILY 3e-238 52-877
HMMTigr TIGR01494 ATPase_P-type: 6.5e-73 346-854
IPR006121 Heavy metal-associated domain, HMA
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046872 metal ion binding    
HMMPfam PF00403 HMA 3.4e-07 85-150
ProfileScan PS50846 HMA_2 15.456 82-154
superfamily SSF55008 HMA, 1.7e-11 83-159
IPR008250 P-type ATPase, A domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0046872 metal ion binding    
Gene3D G3DSA:2.70.150.10 no description 3.3e-26 341-436
HMMPfam PF00122 E1-E2_ATPase 2.4e-51 292-543
IPR018303 P-type ATPase, phosphorylation site
PatternScan PS00154 ATPASE_E1_E2 NA 554-560
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 1.2e-42 691-835
HMMPfam PF00702 Hydrolase 1.8e-39 548-779
superfamily SSF56784 HAD-like 4.6e-38 539-812
IPR023299 P-type ATPase, cytoplasmic domain N
Gene3D G3DSA:3.40.1110.10 no description 3.6e-10 574-690
IPR027256 Cation-transporting P-type ATPase, subfamily IB
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0019829 cation-transporting ATPase activity    
HMMTigr TIGR01525 ATPase-IB_hvy: 3.6e-165 256-876
no_ID  
Gene3D G3DSA:3.30.70.100 no description 4.4e-13 83-155
HMMPanther PTHR24093:SF124SARCOPLASMIC/ENDOPLASMIC RETICULUM 3e-238 52-877
Seg seg seg NA 32-46
202-214
227-238
495-509
659-670
682-691
superfamily SSF81653 Calcium 1.2e-27 337-435
Putative transmembrane regions
  From To
TM segments
SOSUI
829 851
858 880
Wolf-PSORT
Lj1g3v1788240.2	plas 9, chlo 2, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1788240.2