Miyakogusa Predicted Gene

Lj1g3v1788200.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JK05_SOYBN 334 73.7 79.5 (tr|I1JK05) Eukaryotic translation initiation factor 3 subunit B OS=Glycine max PE=3 SV=1
TAIR_pep AT5G27640.1 300 75.0 85.6 | Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3B1 | translation initiation factor 3B1 | chr5:9781207-9784759 REVERSE LENGTH=712
Medicago Medtr3g105430.1 320 80.9 87.8 | eukaryotic translation initiation factor 3 subunit B | HC | chr3:48618144-48613776 | 20130731
Soybean Glyma03g00470.1 334 73.7 79.5  
LJGI gnl|LJGI|TC72934 396 89.1 89.1 similar to UniRef100_A7P685 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1788200.2 length: 224 aa.
IPR011042 Six-bladed beta-propeller, TolB-like
method AccNumber shortName E-value location
Gene3D G3DSA:2.120.10.30 no description 2.4e-06 12-109
IPR011400 Eukaryotic translation initiation factor 3 subunit B
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003743 translation initiation factor activity    
Cellular Component GO:0005852 eukaryotic translation initiation factor 3 complex    
Biological Process GO:0006413 translational initiation    
Molecular Function GO:0031369 translation initiation factor binding    
HMMPanther PTHR14068 EUKARYOTIC 2.8e-77 1-222
IPR013979 Translation initiation factor, beta propellor-like domain
HMMPfam PF08662 eIF2A 2.9e-37 10-111
no_ID  
HMMPanther PTHR14068:SF0 SUBFAMILY 2.8e-77 1-222
Seg seg seg NA 189-216
superfamily SSF69304 Tricorn 5.9e-06 8-117
Wolf-PSORT
Lj1g3v1788200.2	chlo 4, mito 4, chlo_mito 4, nucl 3.5, cyto_nucl 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1788200.2