Miyakogusa Predicted Gene

Lj1g3v1788170.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1K8G2_SOYBN 314 76.9 83.0 (tr|I1K8G2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G26340.1 226 55.9 68.7 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:11215254-11216480 FORWARD LENGTH=253

Medicago Medtr3g105050.1 308 74.7 83.0 | hypothetical protein | HC | chr3:48442946-48439376 | 20130731

Soybean Glyma06g05850.1 314 76.9 83.0

LJGI gnl|LJGI|TC68567 1336 99.9 99.9 similar to UniRef100_A7P4T6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1788170.1 length: 226 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 42-54

Wolf-PSORT

Lj1g3v1788170.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1788170.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1K8G2_SOYBN	314	76.9	83.0	(tr\|I1K8G2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G26340.1	226	55.9	68.7	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr2:11215254-11216480 FORWARD LENGTH=253
Medicago	Medtr3g105050.1	308	74.7	83.0	\| hypothetical protein \| HC \| chr3:48442946-48439376 \| 20130731
Soybean	Glyma06g05850.1	314	76.9	83.0
LJGI	gnl\|LJGI\|TC68567	1336	99.9	99.9	similar to UniRef100_A7P4T6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%)

no_ID
Lj1g3v1788170.1				length: 226 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	42-54