Miyakogusa Predicted Gene

Lj1g3v1787670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3M7_LOTJA 395 78.1 78.1 (tr|I3T3M7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G20510.1 315 60.5 70.8 | Symbols: AL5 | alfin-like 5 | chr5:6939991-6942846 REVERSE LENGTH=260
Medicago Medtr1g015185.1 325 64.1 69.1 | PHD finger alfin-like protein | HC | chr1:3751255-3746618 | 20130731
Soybean Glyma14g11400.1 339 65.8 72.4  
LJGI gnl|LJGI|TC64997 1499 100.0 100.0 similar to UniRef100_A7P4R4 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1787670.1 length: 251 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 1.6e-08 197-245
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 1.3e-15 153-250
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.9e-17 190-248
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 198-244
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 1.2e-09 198-247
ProfileScan PS50016 ZF_PHD_2 9.472 195-247
IPR021998 Protein of unknown function DUF3594
HMMPfam PF12165 DUF3594 2.3e-82 8-144
no_ID  
HMMPanther PTHR12321 CPG 8.6e-166 1-250
HMMPanther PTHR12321:SF12 SUBFAMILY 8.6e-166 1-250
Seg seg seg NA 57-74
148-167
179-195
Wolf-PSORT
Lj1g3v1787670.1	cyto 5, chlo 4, mito 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1787670.1