Miyakogusa Predicted Gene

Lj1g3v1787580.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KI86_SOYBN 1558 85.5 91.6 (tr|K7KI86) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G33090.1 1351 73.3 85.2 | Symbols: APM1, ATAPM1 | aminopeptidase M1 | chr4:15965915-15970418 REVERSE LENGTH=879

Medicago Medtr3g104720.1 1545 84.7 90.9 | puromycin-sensitive aminopeptidase-like protein | HC | chr3:48281753-48275276 | 20130731

Soybean Glyma04g05620.3 1558 85.5 91.6

LJGI gnl|LJGI|TC80900 1624 99.9 99.9 similar to UniRef100_A7P4P1 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1787580.1 length: 874 aa.

IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase

method AccNumber shortName E-value location

Biological Process GO:0006508 proteolysis

HMMPanther PTHR11533 PROTEASE 0 1-868

IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal

Molecular Function GO:0008237 metallopeptidase activity

Molecular Function GO:0008270 zinc ion binding

FPrintScan PR00756 ALADIPTASE 3.9e-29 143-158
190-205
268-278
304-319
323-335

HMMPfam PF01433 Peptidase_M1 2.6e-139 9-395

IPR024571 Domain of unknown function DUF3358

HMMPfam PF11838 DUF3358 1.2e-59 530-846

no_ID

Gene3D G3DSA:1.10.390.10 no description 2.3e-55 317-463

HMMPanther PTHR11533:SF83 HYPOTHETICAL 0 1-868

Seg seg seg NA 807-812
814-829

superfamily SSF55486 Metalloproteases 3e-88 212-462

superfamily SSF63737 Leukotriene 3.2e-54 9-206

Putative transmembrane regions

From To

TM segments
SOSUI 32 54

193 215

Wolf-PSORT

Lj1g3v1787580.1 mito 4, plas 3, E.R. 3, chlo_mito 3, E.R._plas 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1787580.1 Not targeted -17.057 -0.158 -0.264 9.39% -16.635

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KI86_SOYBN	1558	85.5	91.6	(tr\|K7KI86) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G33090.1	1351	73.3	85.2	\| Symbols: APM1, ATAPM1 \| aminopeptidase M1 \| chr4:15965915-15970418 REVERSE LENGTH=879
Medicago	Medtr3g104720.1	1545	84.7	90.9	\| puromycin-sensitive aminopeptidase-like protein \| HC \| chr3:48281753-48275276 \| 20130731
Soybean	Glyma04g05620.3	1558	85.5	91.6
LJGI	gnl\|LJGI\|TC80900	1624	99.9	99.9	similar to UniRef100_A7P4P1 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)

IPR001930	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
Lj1g3v1787580.1				length: 874 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0006508	proteolysis
HMMPanther	PTHR11533	PROTEASE	0	1-868
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal
Molecular Function	GO:0008237	metallopeptidase activity
Molecular Function	GO:0008270	zinc ion binding
FPrintScan	PR00756	ALADIPTASE	3.9e-29	143-158 190-205 268-278 304-319 323-335
HMMPfam	PF01433	Peptidase_M1	2.6e-139	9-395
IPR024571	Domain of unknown function DUF3358
HMMPfam	PF11838	DUF3358	1.2e-59	530-846
no_ID
Gene3D	G3DSA:1.10.390.10	no description	2.3e-55	317-463
HMMPanther	PTHR11533:SF83	HYPOTHETICAL	0	1-868
Seg	seg	seg	NA	807-812 814-829
superfamily	SSF55486	Metalloproteases	3e-88	212-462
superfamily	SSF63737	Leukotriene	3.2e-54	9-206