Miyakogusa Predicted Gene

Lj1g3v1787470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL J3L193_ORYBR 332 65.4 76.4 (tr|J3L193) Uncharacterized protein OS=Oryza brachyantha GN=OB01G29990 PE=3 SV=1
TAIR_pep AT2G26140.1 318 63.1 76.0 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717
Medicago Medtr3g104470.1 327 64.0 75.3 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr3:48116569-48111470 | 20130731
Soybean Glyma17g34610.1 310 60.7 74.2  
LJGI gnl|LJGI|GO036061 751 98.1 98.1 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum sativum|Rep: FtsH-like protease - Pisum sativum (Garden pea), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1787470.1 length: 316 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.4e-14 51-173
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.3e-30 56-170
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 141-159
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-52 7-243
no_ID  
Gene3D G3DSA:1.10.8.60 no description 2.5e-15 180-241
Gene3D G3DSA:3.40.50.300 no description 1.4e-46 16-179
HMMPanther PTHR23076 METALLOPROTEASE 4.7e-102 5-239
HMMPanther PTHR23076:SF10 CELL 4.7e-102 5-239
Seg seg seg NA 112-124
Wolf-PSORT
Lj1g3v1787470.1	cysk 12, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1787470.1