Miyakogusa Predicted Gene
- Lj1g3v1787440.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K8D8_SOYBN |
404 |
92.0 |
95.3 |
(tr|I1K8D8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G11950.2 |
370 |
81.7 |
94.4 |
| Symbols: | Putative lysine decarboxylase family protein | chr5:3855072-3856815 FORWARD LENGTH=216 |
| Medicago |
Medtr1g015830.1 |
388 |
88.9 |
95.7 |
| lysine decarboxylase family protein | HC | chr1:4079142-4074793 | 20130731 |
| Soybean |
Glyma06g05560.1 |
404 |
92.0 |
95.3 |
|
| LJGI |
gnl|LJGI|TC58814 |
1296 |
100.0 |
100.0 |
similar to UniRef100_Q84MC2 Cluster: Lysine decarboxylase-like protein At5g11950; n=2; Arabidopsis thaliana|Rep: Lysine decarboxylase-like protein At5g11950 - Arabidopsis thaliana (Mouse-ear cress), partial (96%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1787440.1 |
length: 216 aa. |
| IPR005269 |
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03641 |
Lysine_decarbox |
1.9e-45 |
55-185 |
| HMMTigr |
TIGR00730 |
TIGR00730: |
9.2e-57 |
12-188 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.450 |
no description |
3.4e-83 |
7-195 |
| HMMPanther |
PTHR31223 |
FAMILY |
8.7e-110 |
8-216 |
| superfamily |
SSF102405 |
MoCo |
7.9e-66 |
6-189 |
- Wolf-PSORT
Lj1g3v1787440.1 nucl 6, chlo 3, mito 3, chlo_mito 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1787440.1 |
|