Miyakogusa Predicted Gene

Lj1g3v1786070.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7J7N5_MEDTR 1090 78.8 83.5 (tr|G7J7N5) Cell division protease ftsH-like protein OS=Medicago truncatula GN=MTR_3g104470 PE=3 SV=1
TAIR_pep AT2G26140.1 967 71.8 81.2 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717
Medicago Medtr3g104470.1 1090 78.8 83.5 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr3:48116569-48111470 | 20130731
Soybean Glyma14g10950.1 1006 75.8 83.4  
LJGI gnl|LJGI|FS318436 1106 100.0 100.0 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum sativum|Rep: FtsH-like protease - Pisum sativum (Garden pea), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1786070.3 length: 696 aa.
IPR000642 Peptidase M41
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006508 proteolysis    
HMMPfam PF01434 Peptidase_M41 1.9e-75 443-643
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 9.4e-26 249-385
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.5e-43 253-382
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 353-371
IPR005936 Peptidase, FtsH
Molecular Function GO:0004222 metalloendopeptidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0030163 protein catabolic process    
HAMAP MF_01458 FtsH 31.779 2-666
HMMTigr TIGR01241 FtsH_fam: 4e-182 203-645
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9e-71 206-455
no_ID  
Gene3D G3DSA:1.10.8.60 no description 7.9e-22 394-466
Gene3D G3DSA:3.40.50.300 no description 1.6e-59 214-393
HMMPanther PTHR23076 METALLOPROTEASE 4.7e-295 155-669
HMMPanther PTHR23076:SF10 CELL 4.7e-295 155-669
Seg seg seg NA 51-58
245-263
430-441
651-657
670-688
superfamily SSF140990 FtsH 8.1e-64 464-657
Putative transmembrane regions
  From To
TM segments
SOSUI
173 195
Wolf-PSORT
Lj1g3v1786070.3	chlo 7, mito 7, chlo_mito 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1786070.3 Not targeted -50.319 0 -4.921 75.01% -45.398