Miyakogusa Predicted Gene

Lj1g3v1786020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KT83_SOYBN 387 70.5 77.9 (tr|K7KT83) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G11870.2 256 46.1 61.0 | Symbols: | Alkaline phytoceramidase (aPHC) | chr5:3825720-3827363 FORWARD LENGTH=270
Medicago Medtr3g104420.1 355 64.7 71.7 | alkaline phytoceramidase (APHC) | HC | chr3:48088534-48094131 | 20130731
Soybean Glyma06g05480.1 382 69.7 77.0  
LJGI gnl|LJGI|GO012833 83.8 90.9 90.9  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1786020.1 length: 270 aa.
IPR008901 Ceramidase
method AccNumber shortName E-value location
Biological Process GO:0006672 ceramide metabolic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides    
HMMPfam PF05875 Ceramidase 4.8e-08 58-225
no_ID  
Seg seg seg NA 65-84
130-141
Putative transmembrane regions
  From To
TM segments
SOSUI		 19 41
62 84
90 111
121 143
147 169
174 195
240 262
Wolf-PSORT
Lj1g3v1786020.1	plas 7, mito 2.5, E.R. 2, cyto_mito 2, chlo 1, vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1786020.1