Miyakogusa Predicted Gene

Lj1g3v1785880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J7M2_MEDTR 272 89.5 90.2 (tr|G7J7M2) NADH-ubiquinone oxidoreductase subunit-like protein OS=Medicago truncatula GN=MTR_3g104310 PE=2 SV=1
TAIR_pep AT5G11770.1 270 88.8 89.5 | Symbols: | NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial | chr5:3791148-3792929 REVERSE LENGTH=218
Medicago Medtr3g104310.1 272 89.5 90.2 | NADH:ubiquinone oxidoreductase protein | HC | chr3:48049840-48045720 | 20130731
Soybean Glyma06g05410.1 267 88.1 89.5  
LJGI gnl|LJGI|TC70654 809 98.6 98.6 homologue to UniRef100_Q9LKH4 Cluster: NADH-ubiquinone oxidoreductase subunit PSST; n=2; Lupinus luteus|Rep: NADH-ubiquinone oxidoreductase subunit PSST - Lupinus luteus (European yellow lupin), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1785880.1 length: 143 aa.
IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit
method AccNumber shortName E-value location
Molecular Function GO:0008137 NADH dehydrogenase (ubiquinone) activity    
Molecular Function GO:0048038 quinone binding    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.50.700 no description 4.6e-32 2-131
HMMPfam PF01058 Oxidored_q6 5.3e-23 18-127
IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit
Molecular Function GO:0008137 NADH dehydrogenase (ubiquinone) activity    
Molecular Function GO:0048038 quinone binding    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
Biological Process GO:0055114 oxidation-reduction process    
HAMAP MF_01356 NDH1_NuoB 38.810 1-132
HMMTigr TIGR01957 nuoB_fam: 1.3e-74 1-133
PatternScan PS01150 COMPLEX1_20K NA 99-115
IPR014406 [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB
Molecular Function GO:0016651 oxidoreductase activity, acting on NAD(P)H    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11995 NADH 8.9e-107 1-141
no_ID  
HMMPanther PTHR11995:SF2 NADH-PLASTOQUINONE 8.9e-107 1-141
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-18
Seg seg seg NA 86-99
superfamily SSF56770 HydA/Nqo6-like 3.4e-61 1-135
Wolf-PSORT
Lj1g3v1785880.1	extr 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1785880.1