Miyakogusa Predicted Gene

Lj1g3v1782140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M8Y0_SOYBN 215 57.8 71.7 (tr|I1M8Y0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G06710.1 176 60.5 78.2 | Symbols: HAT14 | homeobox from Arabidopsis thaliana | chr5:2068305-2070284 REVERSE LENGTH=336
Medicago Medtr1g017090.1 192 51.6 66.1 | homeobox associated leucine zipper protein | LC | chr1:4666392-4663975 | 20130731
Soybean Glyma14g10370.1 215 57.8 71.7  
LJGI gnl|LJGI|FS350920 620 100.0 100.0 similar to UniRef100_A7R6H2 Cluster: Chromosome undetermined scaffold_1278, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1278, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1782140.1 length: 288 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 6.4e-16 135-189
HMMSmart SM00389 Homeodomain 1.7e-15 133-195
ProfileScan PS50071 HOMEOBOX_2 17.151 131-191
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 5.3e-12 191-229
HMMSmart SM00340 homeobox 9.5e-15 191-238
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 7.8e-16 140-189
superfamily SSF46689 Homeodomain-like 1.6e-17 131-206
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 166-189
no_ID  
Coil coil coiled-coil NA 190-228
HMMPanther PTHR24326 FAMILY 1.1e-38 131-270
HMMPanther PTHR24326:SF63 SUBFAMILY 1.1e-38 131-270
Seg seg seg NA 254-274
Wolf-PSORT
Lj1g3v1782140.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1782140.1