Miyakogusa Predicted Gene

Lj1g3v1779010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K897_SOYBN 907 84.2 89.3 (tr|I1K897) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G58440.1 773 79.3 89.4 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21714094-21717246 REVERSE LENGTH=531
Medicago Medtr3g103510.1 904 84.6 89.0 | squalene epoxidase | HC | chr3:47787960-47793388 | 20130731
Soybean Glyma06g05200.1 907 84.2 89.3  
LJGI gnl|LJGI|TC58216 2060 99.9 99.9 similar to UniRef100_Q8GSM8 Cluster: Squalene monooxygenase 1; n=1; Medicago truncatula|Rep: Squalene monooxygenase 1 - Medicago truncatula (Barrel medic), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1779010.1 length: 525 aa.
IPR003042 Aromatic-ring hydroxylase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00420 RNGMNOXGNASE 1.3e-09 62-84
211-226
339-354
354-370
IPR013698 Squalene epoxidase
Molecular Function GO:0004506 squalene monooxygenase activity    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08491 SE 9.8e-124 212-484
no_ID  
Gene3D G3DSA:3.50.50.60 no description 2.8e-25 336-372
HMMPanther PTHR10835 SQUALENE 3.7e-253 53-515
HMMPfam PF01946 Thi4 2.4e-05 53-94
Seg seg seg NA 28-49
65-74
superfamily SSF51905 FAD/NAD(P)-binding 1.2e-45 59-460
Putative transmembrane regions
  From To
TM segments
SOSUI		 7 29
58 80
457 479
483 505
Wolf-PSORT
Lj1g3v1779010.1	plas 7, vacu 3, E.R. 2, extr 1, golg 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1779010.1