Miyakogusa Predicted Gene

Lj1g3v1779000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JTT4_SOYBN 1122 78.4 83.8 (tr|I1JTT4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G07960.1 996 70.8 78.2 | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699
Medicago Medtr3g103500.1 1107 78.9 82.9 | xyloglucan glycosyltransferase | HC | chr3:47779744-47775972 | 20130731
Soybean Glyma04g05100.1 1122 78.4 83.8  
LJGI gnl|LJGI|TC75843 238 94.9 94.9 similar to UniRef100_A7NUD0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1779000.1 length: 704 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 626-647
Gene3D G3DSA:3.90.550.10 no description 7.5e-21 240-492
HMMPanther PTHR32044 FAMILY 0 70-704
HMMPanther PTHR32044:SF0 SUBFAMILY 0 70-704
HMMPfam PF13641 Glyco_tranf_2_3 6.5e-35 241-472
Seg seg seg NA 397-408
502-514
627-650
659-676
superfamily SSF53448 Nucleotide-diphospho-sugar 8.1e-48 238-515
Putative transmembrane regions
  From To
TM segments
SOSUI		 70 91
122 144
167 189
195 216
499 521
534 556
575 596
655 677
679 701
Wolf-PSORT
Lj1g3v1779000.1	plas 10, nucl 1, cyto 1, vacu 1, E.R. 1, cyto_nucl 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1779000.1