Miyakogusa Predicted Gene

Lj1g3v1733460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7KI34_SOYBN 1738 92.4 96.2 (tr|K7KI34) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G10130.1 1548 82.8 90.5 | Symbols: ECA3, ATECA3 | endoplasmic reticulum-type calcium-transporting ATPase 3 | chr1:3311139-3321941 FORWARD LENGTH=998
Medicago Medtr3g103270.1 1734 91.8 95.9 | sarco/endoplasmic reticulum calcium ATPase | HC | chr3:47601880-47629455 | 20130731
Soybean Glyma04g04920.1 1739 92.4 96.2  
LJGI gnl|LJGI|BW610939 942 100.0 100.0 similar to UniRef100_A7NUA6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1733460.1 length: 917 aa.
IPR001757 Cation-transporting P-type ATPase
method AccNumber shortName E-value location
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0019829 cation-transporting ATPase activity    
FPrintScan PR00119 CATATPASE 9.8e-42 89-103
261-275
501-512
523-533
607-626
630-642
FPrintScan PR00120 HATPASE 9.1e-14 579-595
607-623
638-663
HMMPanther PTHR24093 FAMILY 0 1-901
HMMTigr TIGR01494 ATPase_P-type: 6.1e-37 151-283
577-696
IPR005782 Calcium-transporting P-type ATPase, subfamily IIA, SERCA-type
Molecular Function GO:0005388 calcium-transporting ATPase activity    
Biological Process GO:0006816 calcium ion transport    
Cellular Component GO:0016021 integral to membrane    
HMMTigr TIGR01116 ATPase-IIA1_Ca: 2.4e-285 1-762
IPR006068 Cation-transporting P-type ATPase, C-terminal
HMMPfam PF00689 Cation_ATPase_C 6.4e-43 692-890
IPR008250 P-type ATPase, A domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0046872 metal ion binding    
Gene3D G3DSA:2.70.150.10 no description 1.1e-32 35-152
HMMPfam PF00122 E1-E2_ATPase 4.4e-60 8-253
IPR018303 P-type ATPase, phosphorylation site
PatternScan PS00154 ATPASE_E1_E2 NA 263-269
IPR023214 HAD-like domain
HMMPfam PF00702 Hydrolase 4.1e-26 258-621
superfamily SSF56784 HAD-like 1.4e-45 486-656
IPR023298 P-type ATPase, transmembrane domain
Gene3D G3DSA:1.20.1110.10 no description 1.7e-122 575-893
IPR023299 P-type ATPase, cytoplasmic domain N
Gene3D G3DSA:3.40.1110.10 no description 8.6e-70 251-508
superfamily SSF81660 Metal 2.2e-54 268-505
no_ID  
Coil coil coiled-coil NA 27-48
HMMPanther PTHR24093:SF81 SUBFAMILY 0 1-901
Seg seg seg NA 128-140
superfamily SSF81653 Calcium 6.2e-30 38-152
superfamily SSF81665 Calcium 3.9e-103 1-897
Putative transmembrane regions
  From To
TM segments
SOSUI
3 25
169 191
214 235
683 705
736 758
839 861
869 891
Wolf-PSORT
Lj1g3v1733460.1	plas 8, vacu 3, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1733460.1