Miyakogusa Predicted Gene
- Lj1g3v1732410.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KT42_SOYBN |
359 |
91.9 |
94.6 |
(tr|K7KT42) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G37680.2 |
317 |
80.1 |
90.3 |
| Symbols: HHP4 | heptahelical protein 4 | chr4:17701231-17702568 FORWARD LENGTH=385 |
| Medicago |
Medtr3g103240.1 |
359 |
90.9 |
95.7 |
| hemolysin-III-like protein | HC | chr3:47583334-47585548 | 20130731 |
| Soybean |
Glyma04g04900.1 |
354 |
90.9 |
93.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1732410.1 |
length: 186 aa. |
| IPR004254 |
Hly-III-related |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPanther |
PTHR20855 |
ADIPOR/PROGESTIN |
4.6e-118 |
1-186 |
| HMMPfam |
PF03006 |
HlyIII |
6.3e-65 |
1-171 |
| no_ID |
|
| HMMPanther |
PTHR20855:SF14 |
ADIPONECTIN |
4.6e-118 |
1-186 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
26 |
48 |
| 56 |
78 |
| 89 |
111 |
| 118 |
140 |
| 158 |
179 |
- Wolf-PSORT
Lj1g3v1732410.1 chlo 8, mito 3, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1732410.1 |
|