Miyakogusa Predicted Gene

Lj1g3v1732290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JTR1_SOYBN 1105 76.3 83.4 (tr|I1JTR1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G27460.1 752 53.9 69.4 | Symbols: NPGR1 | no pollen germination related 1 | chr1:9534977-9537424 FORWARD LENGTH=694
Medicago Medtr1g018040.1 1040 71.6 80.4 | TPR 7B-like protein | HC | chr1:5167903-5162771 | 20130731
Soybean Glyma04g04850.1 1105 76.3 83.4  
LJGI gnl|LJGI|BP054586 402 99.5 99.5 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1732290.1 length: 717 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.4e-25 319-333
474-708
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 19.602 574-711
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.018 679-707
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 7.6 319-352
513-546
574-607
608-641
678-711
ProfileScan PS50005 TPR 8.703 319-352
574-607
608-641
678-711
no_ID  
Coil coil coiled-coil NA 57-78
HMMPanther PTHR23083 TETRATRICOPEPTIDE 1.3e-185 58-715
HMMPanther PTHR23083:SF163SUBFAMILY NOT 1.3e-185 58-715
Seg seg seg NA 13-22
128-148
262-272
650-655
superfamily SSF48452 TPR-like 2.6e-05 562-714
176-380
28-215
305-536
Wolf-PSORT
Lj1g3v1732290.1	plas 8, nucl 3, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1732290.1