Miyakogusa Predicted Gene

Lj1g3v1720150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1K853_SOYBN 1195 67.8 75.3 (tr|I1K853) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G43130.1 506 39.3 52.1 | Symbols: TAF4, TAF4B | TBP-associated factor 4 | chr5:17315608-17321144 REVERSE LENGTH=823
Medicago Medtr3g102840.1 387 68.2 74.8 | transcription initiation factor | HC | chr3:47389115-47387417 | 20130731
Soybean Glyma06g04820.2 1115 64.6 71.9  
LJGI gnl|LJGI|TC71160 2753 99.4 99.4 similar to UniRef100_A7NU73 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1720150.1 length: 921 aa.
IPR007900 Transcription initiation factor TFIID component TAF4
method AccNumber shortName E-value location
Cellular Component GO:0005669 transcription factor TFIID complex    
Biological Process GO:0006352 DNA-dependent transcription, initiation    
HMMPfam PF05236 TAF4 1.7e-63 613-912
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 2.9e-10 657-703
IPR022003 RST domain of plant C-terminal
HMMPfam PF12174 RST 2.3e-17 181-245
no_ID  
HMMPanther PTHR15138 FAMILY 5e-171 34-913
HMMPanther PTHR15138:SF3 SUBFAMILY 5e-171 34-913
Seg seg seg NA 35-50
190-200
386-395
588-605
787-803
836-847
Wolf-PSORT
Lj1g3v1720150.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1720150.1