Miyakogusa Predicted Gene

Lj1g3v1650130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KSZ8_SOYBN 1120 76.6 85.6 (tr|K7KSZ8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G04860.1 689 50.9 69.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:1706787-1708865 REVERSE LENGTH=692
Medicago Medtr3g101700.1 1089 74.5 84.8 | PPR containing plant-like protein | HC | chr3:46826943-46824374 | 20130731
Soybean Glyma06g04310.1 964 82.1 90.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1650130.1 length: 725 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.8 93-118
317-341
491-514
520-549
594-616
HMMPfam PF13041 PPR_2 1.2e-12 119-163
219-265
418-464
HMMTigr TIGR00756 PPR: 5e-06 121-154
222-255
418-452
520-552
ProfileScan PS51375 PPR 6.149 119-153
88-118
220-254
189-219
315-349
284-314
416-450
385-415
451-485
517-551
486-516
588-618
552-587
654-688
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00059 312-334
601-673
no_ID  
HMMPanther PTHR24015 FAMILY 4.4e-189 41-698
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 4.4e-189 41-698
Seg seg seg NA 59-69
683-694
Wolf-PSORT
Lj1g3v1650130.1	chlo 7, mito 7, chlo_mito 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1650130.1