Miyakogusa Predicted Gene

Lj1g3v1650120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J6D3_MEDTR 999 79.1 86.9 (tr|G7J6D3) DEM2 OS=Medicago truncatula GN=MTR_3g101680 PE=4 SV=1
TAIR_pep AT4G33400.1 861 69.3 79.6 | Symbols: | Vacuolar import/degradation, Vid27-related protein | chr4:16078189-16080410 REVERSE LENGTH=645
Medicago Medtr3g101680.1 999 79.1 86.9 | vacuolar import/degradation, VID27-like protein | HC | chr3:46814722-46811217 | 20130731
Soybean Glyma04g04120.1 998 78.5 85.5  
LJGI gnl|LJGI|TC80777 854 99.1 99.1 similar to UniRef100_O04394 Cluster: Dem protein; n=1; Solanum lycopersicum|Rep: Dem protein - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1650120.1 length: 635 aa.
IPR013863 Vacuolar import/degradation, Vid27-related
method AccNumber shortName E-value location
HMMPfam PF08553 VID27 7.5e-44 163-578
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 7.7e-09 340-489
no_ID  
Coil coil coiled-coil NA 107-128
HMMPanther PTHR31913 FAMILY 5e-28 71-634
Seg seg seg NA 6-24
49-69
111-126
superfamily SSF101908 Putative 1.4e-14 336-533
Wolf-PSORT
Lj1g3v1650120.1	nucl 9, pero 2, cyto 1, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1650120.1