Miyakogusa Predicted Gene

Lj1g3v1650110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T4S4_LOTJA 503 93.2 93.2 (tr|I3T4S4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G45474.2 321 73.9 83.4 | Symbols: LHCA5 | photosystem I light harvesting complex gene 5 | chr1:17179353-17180439 FORWARD LENGTH=256
Medicago Medtr3g101670.1 409 76.1 82.6 | light-harvesting complex I chlorophyll A/B-binding protein | HC | chr3:46810944-46809109 | 20130731
Soybean Glyma06g04280.1 394 73.7 80.5  
LJGI gnl|LJGI|TC64152 1550 99.7 99.7 similar to UniRef100_A7NTV5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1650110.1 length: 266 aa.
IPR001344 Chlorophyll A-B binding protein, plant
method AccNumber shortName E-value location
Biological Process GO:0009765 photosynthesis, light harvesting    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR21649 CHLOROPHYLL 3.8e-102 57-261
IPR022796 Chlorophyll A-B binding protein
HMMPfam PF00504 Chloroa_b-bind 5.6e-48 66-234
IPR023329 Chlorophyll a/b binding protein domain
Gene3D G3DSA:1.10.3460.10 no description 7.7e-66 58-260
superfamily SSF103511 Chlorophyll 1.4e-58 48-263
no_ID  
HMMPanther PTHR21649:SF0 SUBFAMILY 3.8e-102 57-261
Seg seg seg NA 186-202
Putative transmembrane regions
  From To
TM segments
SOSUI		 100 122
217 239
Wolf-PSORT
Lj1g3v1650110.1	chlo 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1650110.1