Miyakogusa Predicted Gene
- Lj1g3v1649000.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J6B6_MEDTR |
719 |
84.5 |
92.1 |
(tr|G7J6B6) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g101490 PE=4 SV=1 |
| TAIR_pep |
AT5G44250.1 |
423 |
52.7 |
69.5 |
| Symbols: | Protein of unknown function DUF829, transmembrane 53 | chr5:17823876-17825620 REVERSE LENGTH=403 |
| Medicago |
Medtr3g101490.2 |
719 |
84.5 |
92.1 |
| DUF829 domain protein | HC | chr3:46712213-46716793 | 20130731 |
| Soybean |
Glyma06g04190.2 |
692 |
81.4 |
90.6 |
|
| LJGI |
gnl|LJGI|TC69357 |
1265 |
100.0 |
100.0 |
similar to UniRef100_A7NTU2 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1649000.1 |
length: 400 aa. |
| IPR008547 |
Protein of unknown function DUF829, TMEM53 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12265 |
UNCHARACTERIZED |
3.8e-61 |
15-279 |
| HMMPfam |
PF05705 |
DUF829 |
2e-24 |
125-371 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
2e-05 |
170-260 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
2.9e-10 |
68-263 |
- Wolf-PSORT
Lj1g3v1649000.1 nucl 8, chlo 2, cyto 2, mito 1, pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1649000.1 |
|