Miyakogusa Predicted Gene
- Lj1g3v1648790.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JTH7_SOYBN |
426 |
86.8 |
92.7 |
(tr|I1JTH7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G15730.1 |
357 |
70.9 |
84.6 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:6849797-6851881 FORWARD LENGTH=344 |
| Medicago |
Medtr1g019990.1 |
384 |
79.1 |
88.5 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:6116035-6118661 | 20130731 |
| Soybean |
Glyma04g03960.1 |
426 |
86.8 |
92.7 |
|
| LJGI |
gnl|LJGI|TC63221 |
89.7 |
89.6 |
89.6 |
similar to UniRef100_A7NTR3 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1648790.1 |
length: 234 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
2.7e-11 |
1-198 |
| no_ID |
|
| HMMPanther |
PTHR32175 |
FAMILY |
2.2e-134 |
1-234 |
| HMMPanther |
PTHR32175:SF0 |
SUBFAMILY |
2.2e-134 |
1-234 |
- Wolf-PSORT
Lj1g3v1648790.1 chlo 4, cyto 4, nucl 1, mito 1, extr 1, vacu 1, pero 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1648790.1 |
|