Miyakogusa Predicted Gene

Lj1g3v1648780.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MXR5_SOYBN 402 75.2 78.6 (tr|I1MXR5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G47500.1 321 72.1 80.6 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein 47C' | chr1:17432682-17434805 FORWARD LENGTH=434
Medicago Medtr3g101370.1 384 73.0 77.5 | polyadenylate-binding protein RBP47C | HC | chr3:46662442-46658399 | 20130731
Soybean Glyma04g03950.1 399 79.3 82.9  
LJGI gnl|LJGI|BP056008 515 98.5 98.5 similar to UniRef100_Q93YF1 Cluster: Nucleic acid binding protein; n=1; Nicotiana tabacum|Rep: Nucleic acid binding protein - Nicotiana tabacum (Common tobacco), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1648780.2 length: 266 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1e-19 32-102
137-200
HMMSmart SM00360 RNA 1.5e-21 31-105
136-203
ProfileScan PS50102 RRM 18.496 30-109
135-207
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2e-25 21-120
121-210
no_ID  
HMMPanther PTHR24012 FAMILY 1.8e-117 3-266
HMMPanther PTHR24012:SF55 SUBFAMILY 1.8e-117 3-266
Seg seg seg NA 112-128
223-236
249-260
superfamily SSF54928 RNA-binding 2.4e-40 28-214
Wolf-PSORT
Lj1g3v1648780.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1648780.2