Miyakogusa Predicted Gene

Lj1g3v1638760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K9P4_SOYBN 324 66.0 70.6 (tr|I1K9P4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G24660.1 207 57.9 68.0 | Symbols: ATHB22, MEE68, HB22, ZHD2 | homeobox protein 22 | chr4:12724851-12725513 REVERSE LENGTH=220
Medicago Medtr3g100650.1 306 61.0 66.8 | homeobox domain, ZF-HD class protein | HC | chr3:46301626-46300635 | 20130731
Soybean Glyma06g09970.1 324 66.0 70.6  
LJGI gnl|LJGI|TC78439 839 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1638760.1 length: 271 aa.
IPR006455 Homeodomain, ZF-HD class
method AccNumber shortName E-value location
HMMTigr TIGR01565 homeo_ZF_HD: 2.6e-24 208-264
IPR006456 ZF-HD homeobox protein, Cys/His-rich dimerisation domain
BlastProDom PD125774 Q6YXH5_ORYSA_Q6YXH5; 5e-20 64-128
HMMPfam PF04770 ZF-HD_dimer 3e-27 75-129
HMMTigr TIGR01566 ZF_HD_prot_N: 9.4e-26 77-127
ProfileScan PS51523 ZF_HD_DIMER 26.733 78-127
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.2e-29 194-270
superfamily SSF46689 Homeodomain-like 6.7e-21 192-271
no_ID  
Coil coil coiled-coil NA 3-30
HMMPanther PTHR31948 FAMILY 1.7e-68 11-271
HMMPanther PTHR31948:SF0 SUBFAMILY 1.7e-68 11-271
Seg seg seg NA 10-27
49-63
136-144
Wolf-PSORT
Lj1g3v1638760.1	nucl 12, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1638760.1