Miyakogusa Predicted Gene

Lj1g3v1625460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S9I2_LOTJA 466 100.0 100.0 (tr|I3S9I2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G47640.1 417 86.8 94.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr1:17518409-17519998 REVERSE LENGTH=228
Medicago Medtr3g100940.1 458 98.2 98.2 | seven transmembrane domain protein | HC | chr3:46447345-46450791 | 20130731
Soybean Glyma06g03910.1 454 97.4 98.2  
LJGI gnl|LJGI|TC60820 1362 100.0 100.0 homologue to UniRef100_A7NTN3 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1625460.1 length: 228 aa.
IPR019164 Protein of unknown function DUF2053, membrane
method AccNumber shortName E-value location
HMMPanther PTHR12869 SMALL 1.1e-101 2-228
HMMPfam PF09767 DUF2053 3.3e-63 2-161
no_ID  
HMMPanther PTHR12869:SF0 SUBFAMILY 1.1e-101 2-228
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
36 58
69 91
140 161
167 189
199 221
Wolf-PSORT
Lj1g3v1625460.1	extr 4, chlo 2, cyto 2, mito 2, chlo_mito 2, plas 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, cyto_mito 1, golg_plas 1, E.R._vacu 1, cyto_pero 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1625460.1