Miyakogusa Predicted Gene

Lj1g3v1561430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K9P1_SOYBN 626 88.7 94.3 (tr|I1K9P1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G10940.2 552 78.0 87.5 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:3448890-3454127 REVERSE LENGTH=754
Medicago Medtr3g100690.1 604 83.9 92.6 | transducin/WD-like repeat-protein | HC | chr3:46335782-46323405 | 20130731
Soybean Glyma04g09890.3 603 84.0 89.4  
LJGI gnl|LJGI|FS333406 942 99.4 99.4 similar to UniRef100_Q10QQ8 Cluster: Expressed protein; n=1; Oryza sativa Japonica Group|Rep: Expressed protein - Oryza sativa subsp. japonica (Rice), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1561430.1 length: 336 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.0048 44-78
87-123
HMMSmart SM00320 WD40 2.8e+02 39-78
81-123
136-176
211-244
265-307
ProfileScan PS50082 WD_REPEATS_2 15.421 46-87
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.4e-41 39-310
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 18.273 46-132
superfamily SSF50978 WD40 1.7e-31 38-330
no_ID  
HMMPanther PTHR15574 WD 4e-111 4-311
HMMPanther PTHR15574:SF6 WD 4e-111 4-311
Wolf-PSORT
Lj1g3v1561430.1	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1561430.1