Miyakogusa Predicted Gene

Lj1g3v1548800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K9R9_SOYBN 484 69.7 79.6 (tr|I1K9R9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G09700.1 266 67.9 80.0 | Symbols: HYL1, DRB1 | dsRNA-binding domain-like superfamily protein | chr1:3137960-3140118 REVERSE LENGTH=419
Medicago Medtr3g100120.2 412 65.7 77.3 | double-stranded RNA-binding motif protein | LC | chr3:46001282-45997216 | 20130731
Soybean Glyma06g10200.2 484 69.7 79.6  
LJGI gnl|LJGI|CB826912 1082 100.0 100.0 similar to UniRef100_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1548800.1 length: 404 aa.
IPR001159 Double-stranded RNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003725 double-stranded RNA binding    
HMMPfam PF00035 dsrm 2.6e-13 70-132
156-219
HMMSmart SM00358 Double-stranded 2.7e-13 69-136
155-222
ProfileScan PS50137 DS_RBD 11.480 68-137
154-223
IPR014720 Double-stranded RNA-binding-like domain
Gene3D G3DSA:3.30.160.20 no description 2.8e-13 69-135
156-222
no_ID  
HMMPanther PTHR32503 FAMILY 2.8e-21 69-217
HMMPanther PTHR32503:SF0 SUBFAMILY 2.8e-21 69-217
Seg seg seg NA 38-49
250-259
superfamily SSF54768 dsRNA-binding 2.3e-13 42-135
155-223
Wolf-PSORT
Lj1g3v1548800.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1548800.1