Miyakogusa Predicted Gene

Lj1g3v1537660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JV87_SOYBN 501 74.9 79.2 (tr|I1JV87) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G21175.2 219 61.3 71.8 | Symbols: ZML1, GATA24 | ZIM-like 1 | chr3:7422832-7424598 FORWARD LENGTH=295
Medicago Medtr3g100040.1 434 73.5 81.3 | GATA transcription factor | HC | chr3:45925626-45916495 | 20130731
Soybean Glyma04g10340.1 501 74.9 79.2  
LJGI gnl|LJGI|TC68035 2020 99.5 99.5 similar to UniRef100_A7QM28 Cluster: Chromosome undetermined scaffold_123, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_123, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1537660.1 length: 345 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 2.4e-14 196-232
HMMSmart SM00401 zinc 8.2e-12 190-243
PatternScan PS00344 GATA_ZN_FINGER_1 NA 196-223
ProfileScan PS50114 GATA_ZN_FINGER_2 8.880 190-249
IPR010399 Tify
HMMPfam PF06200 tify 6e-09 60-91
HMMSmart SM00979 no description 2.1e-07 57-92
ProfileScan PS51320 TIFY 12.914 57-92
IPR010402 CCT domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 5.2e-16 125-167
ProfileScan PS51017 CCT 12.650 125-167
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 5.3e-13 194-234
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 3.4e-24 94-238
HMMPanther PTHR10071:SF128SUBFAMILY NOT 3.4e-24 94-238
Seg seg seg NA 19-40
superfamily SSF57716 Glucocorticoid 8e-14 185-253
Wolf-PSORT
Lj1g3v1537660.1	nucl 12, extr 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1537660.1