Miyakogusa Predicted Gene

Lj1g3v1526210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KJ76_SOYBN 749 75.9 84.2 (tr|K7KJ76) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G27460.1 463 49.1 68.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:9693262-9694815 REVERSE LENGTH=491
Medicago Medtr3g099753.2 733 73.7 84.4 | PPR containing plant-like protein | HC | chr3:45738160-45740519 | 20130731
Soybean Glyma06g10400.1 746 77.9 86.9  
LJGI gnl|LJGI|TC59804 1324 100.0 100.0 weakly similar to UniRef100_A7NUR4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1526210.1 length: 503 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0036 253-272
357-376
ProfileScan PS51375 PPR 6.149 174-208
139-173
209-241
247-277
352-386
317-347
387-417
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.9e-06 348-424
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-200 1-500
HMMPanther PTHR24015:SF127SUBFAMILY NOT 1.6e-200 1-500
Seg seg seg NA 2-21
219-234
Wolf-PSORT
Lj1g3v1526210.1	mito 9, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1526210.1