Miyakogusa Predicted Gene

Lj1g3v1514800.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JVB5_SOYBN 807 77.6 82.1 (tr|I1JVB5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G11870.2 688 72.9 82.8 | Symbols: ATSRS, SRS | Seryl-tRNA synthetase | chr1:4003895-4006556 FORWARD LENGTH=514
Medicago Medtr3g099470.1 806 77.1 82.1 | seryl-tRNA synthetase/serine-tRNA ligase | HC | chr3:45589841-45593917 | 20130731
Soybean Glyma04g10750.1 807 77.6 82.1  
LJGI gnl|LJGI|TC77983 1624 98.2 98.2 similar to UniRef100_Q944K1 Cluster: At1g11870/F12F1_29; n=1; Arabidopsis thaliana|Rep: At1g11870/F12F1_29 - Arabidopsis thaliana (Mouse-ear cress), partial (54%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1514800.2 length: 513 aa.
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00587 tRNA-synt_2b 6.2e-32 248-416
IPR002317 Serine-tRNA ligase, type1
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004828 serine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006434 seryl-tRNA aminoacylation    
FPrintScan PR00981 TRNASYNTHSER 4.9e-22 338-350
350-363
390-403
407-423
425-441
HMMPIR PIRSF001529 Serine-tRNA 9.3e-164 79-513
HMMPanther PTHR11778 SERYL-TRNA 2e-204 73-512
HMMTigr TIGR00414 serS: 1.5e-129 79-503
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 21.701 213-496
IPR010978 tRNA-binding arm
Molecular Function GO:0000166 nucleotide binding    
superfamily SSF46589 tRNA-binding 9.3e-26 78-188
IPR015866 Serine-tRNA synthetase, type1, N-terminal
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004828 serine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006434 seryl-tRNA aminoacylation    
Gene3D G3DSA:1.10.287.40 no description 1.1e-16 79-180
HMMPfam PF02403 Seryl_tRNA_N 5.2e-20 79-183
no_ID  
Coil coil coiled-coil NA 144-179
Gene3D G3DSA:3.30.930.10 no description 1.1e-131 181-506
Seg seg seg NA 50-68
161-172
220-230
339-345
superfamily SSF55681 Class 2.7e-78 189-512
Wolf-PSORT
Lj1g3v1514800.2	chlo 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1514800.2