Miyakogusa Predicted Gene
- Lj1g3v1514790.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J3Z2_MEDTR |
233 |
79.6 |
87.6 |
(tr|G7J3Z2) DUF246 domain-containing protein OS=Medicago truncatula GN=MTR_3g099480 PE=4 SV=1 |
| TAIR_pep |
AT1G22460.1 |
171 |
59.0 |
76.9 |
| Symbols: | O-fucosyltransferase family protein | chr1:7927530-7930351 REVERSE LENGTH=565 |
| Medicago |
Medtr3g099480.1 |
233 |
79.6 |
87.6 |
| auxin-independent growth promoter-like protein | HC | chr3:45598636-45594372 | 20130731 |
| Soybean |
Glyma06g10610.1 |
229 |
77.1 |
84.0 |
|
| LJGI |
gnl|LJGI|BP069184 |
161 |
80.7 |
80.7 |
similar to UniRef100_A7NUU4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1514790.1 |
length: 150 aa. |
| IPR019378 |
GDP-fucose protein O-fucosyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10250 |
O-FucT |
5.3e-13 |
7-62 |
| no_ID |
|
| HMMPanther |
PTHR31741 |
FAMILY |
4.9e-61 |
7-150 |
| HMMPanther |
PTHR31741:SF0 |
SUBFAMILY |
4.9e-61 |
7-150 |
| Seg |
seg |
seg |
NA |
101-110 |
- Wolf-PSORT
Lj1g3v1514790.1 nucl 8, cyto 2, extr 1, cysk 1, golg 1, E.R._vacu 1, cyto_pero 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1514790.1 |
|