Miyakogusa Predicted Gene

Lj1g3v1502590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SBJ9_LOTJA 321 82.6 82.6 (tr|I3SBJ9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G63470.2 283 81.6 83.9 | Symbols: NF-YC4 | nuclear factor Y, subunit C4 | chr5:25416332-25417084 REVERSE LENGTH=250
Medicago Medtr3g099180.2 280 94.7 98.0 | nuclear transcription factor Y protein | HC | chr3:45466714-45470003 | 20130731
Soybean Glyma06g17780.1 299 94.6 98.7  
LJGI gnl|LJGI|TC58223 1162 100.0 100.0 homologue to UniRef100_Q9SMP0 Cluster: Nuclear transcription factor Y subunit C-1; n=1; Arabidopsis thaliana|Rep: Nuclear transcription factor Y subunit C-1 - Arabidopsis thaliana (Mouse-ear cress), partial (70%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1502590.1 length: 197 aa.
IPR003958 Transcription factor CBF/NF-Y/archaeal histone
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00808 CBFD_NFYB_HMF 3.6e-21 66-129
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 4e-36 67-144
superfamily SSF47113 Histone-fold 4.1e-34 7-139
IPR027170 Transcriptional activator NFYC/HAP5 subunit
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Cellular Component GO:0016602 CCAAT-binding factor complex    
HMMPanther PTHR10252:SF6 CCAAT-BINDING 2.2e-74 35-183
no_ID  
HMMPanther PTHR10252 HISTONE-LIKE 2.2e-74 35-183
Seg seg seg NA 10-33
37-46
Wolf-PSORT
Lj1g3v1502590.1	nucl 8, mito 3, chlo 1, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1502590.1