Miyakogusa Predicted Gene

Lj1g3v1502550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J3V8_MEDTR 780 66.5 72.2 (tr|G7J3V8) Nodulin-like protein OS=Medicago truncatula GN=MTR_3g099150 PE=4 SV=1
TAIR_pep AT3G01930.2 486 45.2 60.8 | Symbols: | Major facilitator superfamily protein | chr3:319289-321488 REVERSE LENGTH=584
Medicago Medtr3g099150.1 780 66.5 72.2 | nodulin-like/MFS transporter | HC | chr3:45450834-45453582 | 20130731
Soybean Glyma04g37320.1 767 66.2 74.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1502550.1 length: 593 aa.
IPR010658 Nodulin-like
method AccNumber shortName E-value location
HMMPfam PF06813 Nodulin-like 2e-85 15-262
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 4e-28 1-582
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 5.6e-13 16-200
553-579
HMMPanther PTHR21576 UNCHARACTERIZED 9.1e-278 1-590
HMMPanther PTHR21576:SF12 SUBFAMILY 9.1e-278 1-590
Seg seg seg NA 82-97
220-232
242-267
303-316
369-379
Putative transmembrane regions
  From To
TM segments
SOSUI		 9 28
80 102
112 134
145 167
176 198
211 233
244 266
361 383
428 450
457 479
551 573
Wolf-PSORT
Lj1g3v1502550.1	plas 7, chlo 3, cyto 2, vacu 1, E.R. 1, cyto_nucl 1, E.R._vacu 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1502550.1