Miyakogusa Predicted Gene

Lj1g3v1500470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KL70_SOYBN 749 75.2 79.2 (tr|K7KL70) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G63490.1 567 57.3 70.6 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein | chr5:25418716-25421970 REVERSE LENGTH=543
Medicago Medtr3g099100.1 729 72.4 79.7 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain protein | HC | chr3:45426670-45434715 | 20130731
Soybean Glyma04g37370.1 750 75.2 79.2  
LJGI gnl|LJGI|AV417825 793 99.8 99.8 similar to UniRef100_Q9LUF7 Cluster: Emb|CAB86899.1; n=2; Arabidopsis thaliana|Rep: Emb|CAB86899.1 - Arabidopsis thaliana (Mouse-ear cress), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1500470.1 length: 532 aa.
IPR000270 Phox/Bem1p
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00564 PB1 2.2e-12 399-482
HMMSmart SM00666 PB1 1.8e-15 399-484
IPR000644 Cystathionine beta-synthase, core
Molecular Function GO:0005515 protein binding    
HMMPfam PF00571 CBS 6.2e-05 53-99
113-154
222-268
280-326
HMMSmart SM00116 Domain 10 54-102
120-164
222-269
287-335
ProfileScan PS51371 CBS 9.639 51-108
117-175
216-275
284-345
no_ID  
Gene3D G3DSA:3.10.20.240 no description 5.1e-20 396-482
Gene3D G3DSA:3.10.580.10 no description 1.8e-24 45-163
214-328
HMMPanther PTHR11911 INOSINE-5-MONOPHOSPHATE 1.7e-185 39-431
HMMPanther PTHR11911:SF18 MG2+ 1.7e-185 39-431
Seg seg seg NA 2-30
173-189
320-338
454-467
508-522
superfamily SSF54277 CAD 3.2e-20 387-482
superfamily SSF54631 CBS-domain 4.2e-06 270-337
101-174
37-102
191-265
Putative transmembrane regions
  From To
TM segments
SOSUI		 508 529
Wolf-PSORT
Lj1g3v1500470.1	chlo 8.5, chlo_mito 7, mito 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1500470.1 Not targeted -18.143 -8.893 -0.245 10.62% -9.005